Our Publications

We broadcast research in scientific journals


  • Doostparast Torshizi A, Armoskus C, Zhang S, Zhang H, Evgrafov OV, Knowles JA, Duan J*, Wang K*: Deconvolution of Transcriptional Networks Identified TCF4 as a Master Regulator in Schizophrenia. BioRxiv, doi: https://doi.org/10.1101/133363, 2017
  • Yang H, Chen G, Lima L, Fang H, Jimenez L, Li M, Lyon GJ, He M, Wang K: HadoopCNV: A dynamic programming imputation algorithm to detect copy number variants from sequencing data. BioRxiv, doi: https://doi.org/10.1101/124339, 2017
  • Evgrafov OV, Armoskus C, Wrobel BB, Spitsyna VN, Souaiaia T, Herstein JS, Walker CP, Nguyen JD, Camarena A, Weitz JR, Kim JM, Lopez Duarte E, Wang K, Simpson GM, Sobell JL, Medeiros H, Pato MT, Pato CN, Knowles JA. Gene expression in patient-derived neural progenitors provide insights into neurodevelopmental aspects of schizophrenia. BioRxiv, doi: https://doi.org/10.1101/209197, 2017
  • Dai Y, Li P, Wang Z, Liang F, Yang F, Fang L, Huang Y, Huang S, Zhou J, Wang D, Cui L, Wang K: Single-molecule optical mapping enables accurate molecular diagnosis of facioscapulohumeral muscular dystrophy (FSHD). BioRxiv, doi: https://doi.org/10.1101/286104, 2018
  • Khan A, Liu Q, Chen X, Zeng Y, Stucky A, Sedghizadeh PP, Adelpour D, Zhang X, Wang K*, Zhong JF*: VirTect: a computational method for detecting virus species from RNA-Seq and its application in head and neck squamous cell carcinoma. BioRxiv, doi: https://doi.org/10.1101/272278, 2018
  • Liu Q, Georgieva DC, Egli DM, Wang K: NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data. BioRxiv, doi: https://doi.org/10.1101/277178, 2018
  • Miao H, Zhou J, Yang Q, Liang F, Wang D, Ma N, Gao B, Du J, Lin G, Wang K*, Zhang Q*. Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis. BioRxiv, doi: https://doi.org/10.1101/326496, 2018
  • Doostparast Torshizi A, Duan J, Wang K. Transcriptional Network Analysis on Brains Reveals a Potential Regulatory Role of PPP1R3F in Autism Spectrum Disorders. BioRxiv, doi: https://doi.org/10.1101/330449, 2018
  • Hu L, Liang F, Cheng D, Zhang Z, Yu G, Zha J, Wang Y, Wang F, Tan Y, Wang D, Wang K*, Lin G*. Localization of balanced chromosome translocation breakpoints by long-read sequencing on the Oxford Nanopore platform. BioRxiv, doi: https://doi.org/10.1101/419531, 2018
  • Fang L, Kao C, Gonzalez MV, Pellegrino da Silva R, Li M, Hakonarson H, Wang K. LinkedSV: Detection of mosaic structural variants from linked-read exome and genome sequencing data. BioRxiv, doi: https://doi.org/10.1101/409789, 2018

Selected Publications


Book Chapters

  1. Guan Y, Wang K. Whole-genome multi-SNP analysis. In: Statistical Bioinformatics Edited by Do KA, Qin Z, Vannucci M. Cambridge University Press, 2013
  2. Wang K. Epistasis. In: Encyclopedia of Autism Spectrum Disorders. Edited by Volkmar FR. Springer, 2013
  3. Fang L, Wang K. Identification of Copy Number Variants from SNP Arrays Using PennCNV. In: Methods in Molecular Biology. vol. 1833, Edited by Bickhart D. Springer, 2018


Other links

The Google Citation report for the PI can be accessed here (Total citation: >25,000; H-index: 62).

The full list of publications can be accessed here.