Our Publications

We broadcast research in scientific journals


  • Georgieva D, Liu Q, Wang K, Egli D. Detection of Base Analogs Incorporated During DNA Replication by Nanopore Sequencing. bioRxiv, 2019. Notes: doi: https://doi.org/10.1101/549220
  • Fang L, Kao C, Gonzalez MV, Mafra FA, Pellegrino da Silva R, Li M, Hakonarson H, Wang K. LinkedSV: Detection of mosaic structural variants from linked-read exome and genome sequencing data. BioRxiv, 2018. Notes: doi: https://doi.org/10.1101/409789
  • Khan A, Liu Q, Chen X, Zeng Y, Stucky A, Sedghizadeh PP, Adelpour D, Zhang X, Wang K*, Zhong JF*: VirTect: a computational method for detecting virus species from RNA-Seq and its application in head and neck squamous cell carcinoma. BioRxiv, 2018. Notes: doi: https://doi.org/10.1101/272278
  • Hu L, Liang F, Cheng D, Zhang Z, Yu G, Zha J, Wang Y, Wang F, Tan Y, Wang D, Wang K*, Lin G*. Localization of balanced chromosome translocation breakpoints by long-read sequencing on the Oxford Nanopore platform, Biorxiv, 2018. Notes: doi: https://doi.org/10.1101/419531
  • Doostparast Torshizi A, Armoskus C, Zhang S, Zhang H, Souaiaia T, Forrest MP, Evgrafov OV, Knowles JA, Duan J*, Wang K*: Deconvolution of Transcriptional Networks Identified TCF4 as a Master Regulator in Schizophrenia. bioRxiv, 2018 Notes: doi:https://doi.org/10.1101/133363
  • Miao H, Zhou J, Yang Q, Liang F, Wang D, Ma N, Gao B, Du J, Lin G, Wang K*, Zhang Q*: Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis. BioRxiv, 2018 Notes: doi: https://doi.org/10.1101/326496
  • Dai Y, Li P, Wang Z, Liang F, Yang F, Fang L, Huang Y, Huang S, Zhou J, Wang D, Cui L, Wang K: Single-molecule optical mapping enables accurate molecular diagnosis of facioscapulohumeral muscular dystrophy (FSHD). BioRxiv, 2018 Notes: doi: https://doi.org/10.1101/286104
  • Evgrafov OV, Armoskus C, Wrobel BB, Spitsyna VN, Souaiaia T, Herstein JS, Walker CP, Nguyen JD, Camarena A, Weitz JR, Kim JM, Duarte EL, Wang K, Simpson GM, Sobell JL, Medeiros H, Pato MT, Pato CN, Knowles JA: Gene expression in patient-derived neural progenitors provide insights into neurodevelopmental aspects of schizophrenia. BioRxiv, 2017 Notes: doi: https://doi.org/10.1101/209197
  • Yang H, Chen G, Lima L, Fang H, Jimenez L, Li M, Lyon GJ, He M, Wang K: HadoopCNV: A dynamic programming imputation algorithm to detect copy number variants from sequencing data. bioRxiv, 2017 Notes: doi: https://doi.org/10.1101/124339


Selected Publications


Book Chapters

  1. Guan Y, Wang K. Whole-genome multi-SNP analysis. In: Statistical Bioinformatics Edited by Do KA, Qin Z, Vannucci M. Cambridge University Press, 2013
  2. Wang K. Epistasis. In: Encyclopedia of Autism Spectrum Disorders. Edited by Volkmar FR. Springer, 2013
  3. Fang L, Wang K. Identification of Copy Number Variants from SNP Arrays Using PennCNV. In: Methods in Molecular Biology. Edited by Derek Bickhart. Springer, vol. 1833, 2018


Other links

The Google Citation report for the PI can be accessed here (Total citation: >30,000; H-index: 64).

The full list of publications can be accessed here.