We develop software tools for genomics
Analysis of chromosome conformation capture combined with high-throughput sequencing (4C-seq)
We leverage big data framework for detection of structural variants from NGS data.
Phenotype/disease specific gene prioritization and gene network visualization.
Identification of cancer driver genes/variants and optimal drug treatments from sequencing, expression and structural variants data.
Enlight is a web server that generates figures with epigenetic information and other biological annotations on top of GWAS results.
wANNOVAR (web ANNOVAR) is a web application for annotating genetic variants with respect to disease phenotypes.
SeqMule is an automated pipeline to generate variant calls from FASTQ or BAM files, using more than 10 popular alignment and variant calling tools.
SeqHBase: A big data toolset for family-based sequencing data analysis.
Detection of copy number alterations (CNAs) and estimation of stromal contamination on tumor samples